Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 KRT17P7-201ENST00000451704 1104 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 SLC25A47P1-201ENST00000531577 414 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 AC132938.2-201ENST00000579188 680 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 IGHV3-72-202ENST00000621503 303 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 AL591163.1-201ENST00000641757 987 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 CICP16-201ENST00000502609 2813 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 FAM90A12P-201ENST00000519497 2375 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 FAM90A24P-201ENST00000520792 2369 ntBASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATPAF1Q5TC12 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AC020658.7-201ENST00000624274 2442 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AC020910.6-201ENST00000623084 1459 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TTTY23B-201ENST00000442790 549 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AP001889.1-201ENST00000525414 633 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AC106886.1-201ENST00000568660 600 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 BTNL10-201ENST00000595971 695 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AC233724.13-201ENST00000598383 410 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 Z82170.1-201ENST00000625081 3192 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 AL731571.1-201ENST00000617058 5428 ntBASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATPAF1Q5TC12 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms