Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.9□□□□□ -0.02
ALFQ53S48 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.9□□□□□ -0.02
ALFQ53S48 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.9□□□□□ -0.02
ALFQ53S48 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ALFQ53S48 AC104506.1-201ENST00000609247 429 ntBASIC14.9□□□□□ -0.02
ALFQ53S48 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.9□□□□□ -0.02
ALFQ53S48 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.9□□□□□ -0.02
ALFQ53S48 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ALFQ53S48 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALFQ53S48 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ALFQ53S48 RN7SKP214-201ENST00000364208 315 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ALFQ53S48 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ALFQ53S48 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 CYP46A4P-201ENST00000414953 267 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 ACTG1P2-201ENST00000415776 1125 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 ACTG1P11-201ENST00000425411 1125 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 AC011742.3-201ENST00000439053 820 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 AC005077.2-201ENST00000449786 690 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ALFQ53S48 NDUFV2P1-201ENST00000596415 907 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 AL805961.1-203ENST00000641078 1258 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 HSPA8P5-201ENST00000456928 2069 ntBASIC14.89□□□□□ -0.03
ALFQ53S48 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ALFQ53S48 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALFQ53S48 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 AC117489.1-201ENST00000625169 3217 ntBASIC14.88□□□□□ -0.03
ALFQ53S48 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
ALFQ53S48 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ALFQ53S48 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 AL009178.2-201ENST00000597278 2719 ntBASIC14.88□□□□□ -0.03
ALFQ53S48 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.88□□□□□ -0.03
ALFQ53S48 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ALFQ53S48 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.88□□□□□ -0.03
ALFQ53S48 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
ALFQ53S48 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ALFQ53S48 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ALFQ53S48 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.88□□□□□ -0.03
ALFQ53S48 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ALFQ53S48 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.88□□□□□ -0.03
ALFQ53S48 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms