Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB1P98172 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB1P98172 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 MSNP1-201ENST00000511640 1732 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 TMBIM7P-202ENST00000641474 1516 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 SALL4P6-201ENST00000429385 1691 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 AC010970.1-201ENST00000445125 1848 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 AC025183.3-201ENST00000623526 1482 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.93□□□□□ -0.34
EFNB1P98172 ST13P19-201ENST00000442505 1124 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 AC093214.1-201ENST00000511688 1107 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.93□□□□□ -0.34
EFNB1P98172 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 AL132655.2-201ENST00000596276 594 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB1P98172 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.93□□□□□ -0.34
EFNB1P98172 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB1P98172 Z98257.2-202ENST00000641138 1548 ntBASIC12.93□□□□□ -0.34
EFNB1P98172 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB1P98172 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 AC007952.5-201ENST00000572818 1486 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB1P98172 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB1P98172 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 TPM3P8-201ENST00000330554 643 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB1P98172 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB1P98172 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
EFNB1P98172 AC010141.1-201ENST00000411585 623 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.92□□□□□ -0.34
EFNB1P98172 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB1P98172 SERBP1P5-201ENST00000510079 1181 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB1P98172 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB1P98172 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB1P98172 GNRHR2-203ENST00000581100 1187 ntBASIC12.92□□□□□ -0.34
EFNB1P98172 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB1P98172 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms