Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX3P78415 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.98■□□□□ 0.31
IRX3P78415 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.98■□□□□ 0.31
IRX3P78415 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX3P78415 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
IRX3P78415 COL6A4P2-202ENST00000504443 2753 ntBASIC16.97■□□□□ 0.31
IRX3P78415 TMBIM7P-202ENST00000641474 1516 ntBASIC16.97■□□□□ 0.31
IRX3P78415 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX3P78415 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX3P78415 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
IRX3P78415 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.97■□□□□ 0.31
IRX3P78415 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 AL355334.1-201ENST00000417713 215 ntBASIC16.97■□□□□ 0.31
IRX3P78415 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX3P78415 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX3P78415 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.97■□□□□ 0.31
IRX3P78415 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 AC093752.3-201ENST00000567343 901 ntBASIC16.97■□□□□ 0.31
IRX3P78415 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
IRX3P78415 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX3P78415 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX3P78415 MIR6842-201ENST00000612539 65 ntBASIC16.97■□□□□ 0.31
IRX3P78415 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IRX3P78415 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IRX3P78415 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX3P78415 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX3P78415 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX3P78415 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX3P78415 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX3P78415 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX3P78415 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 KRT18P36-201ENST00000411618 1276 ntBASIC16.96■□□□□ 0.31
IRX3P78415 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.96■□□□□ 0.31
IRX3P78415 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.96■□□□□ 0.31
IRX3P78415 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.96■□□□□ 0.31
IRX3P78415 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.96■□□□□ 0.31
IRX3P78415 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 HLA-C-210ENST00000640219 976 ntBASIC16.96■□□□□ 0.31
IRX3P78415 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
IRX3P78415 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IRX3P78415 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IRX3P78415 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IRX3P78415 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IRX3P78415 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.96■□□□□ 0.3
IRX3P78415 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
IRX3P78415 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
IRX3P78415 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
IRX3P78415 AHCYP4-201ENST00000419201 1315 ntBASIC16.96■□□□□ 0.3
IRX3P78415 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
IRX3P78415 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
IRX3P78415 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.95■□□□□ 0.3
IRX3P78415 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
IRX3P78415 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 RNA5SP359-201ENST00000364838 113 ntBASIC16.95■□□□□ 0.3
IRX3P78415 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
IRX3P78415 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
IRX3P78415 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 AC114501.1-201ENST00000445949 172 ntBASIC16.95■□□□□ 0.3
IRX3P78415 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms