Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC104457.1-201ENST00000401024 814 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 BAATP1-201ENST00000412284 1225 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 TPT1P11-201ENST00000458482 498 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC119751.2-201ENST00000504529 210 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 AP001063.1-201ENST00000568332 529 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.83□□□□□ -0.36
SEC61A1P61619 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC093813.1-201ENST00000605066 256 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 REXO1L4P-201ENST00000605109 1937 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 AC134312.5-201ENST00000568031 1313 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 AL138799.1-201ENST00000448213 1675 ntBASIC12.83□□□□□ -0.36
SEC61A1P61619 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC073548.1-201ENST00000624088 1882 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 CES1P1-201ENST00000421606 1704 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC114271.1-201ENST00000612689 2813 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC004945.1-201ENST00000416738 983 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 AC012441.1-201ENST00000446669 685 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SEC61A1P61619 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC009486.1-201ENST00000569860 813 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.82□□□□□ -0.36
SEC61A1P61619 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 AL022328.1-201ENST00000610050 478 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 MIR6805-201ENST00000615055 62 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.82□□□□□ -0.36
SEC61A1P61619 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.82□□□□□ -0.36
SEC61A1P61619 PDIA3P1-201ENST00000471856 1510 ntBASIC12.82□□□□□ -0.36
SEC61A1P61619 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEC61A1P61619 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms