Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.47□□□□□ -0.73
LINC00315P59091 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 KRT8P28-201ENST00000433288 1390 ntBASIC10.47□□□□□ -0.73
LINC00315P59091 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC00315P59091 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC00315P59091 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 MARK2P9-201ENST00000430958 1727 ntBASIC10.47□□□□□ -0.73
LINC00315P59091 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00315P59091 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LINC00315P59091 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 AC083964.2-201ENST00000623988 2396 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC00315P59091 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC00315P59091 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 AC022137.2-201ENST00000503482 481 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.46□□□□□ -0.73
LINC00315P59091 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 RPL28-206ENST00000558752 671 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 AC027237.1-201ENST00000560942 655 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 AP001063.1-201ENST00000568332 529 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00315P59091 AC009486.1-201ENST00000569860 813 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00315P59091 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC00315P59091 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00315P59091 FKBP4P6-201ENST00000457486 1332 ntBASIC10.46□□□□□ -0.73
LINC00315P59091 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00315P59091 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00315P59091 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00315P59091 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00315P59091 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC00315P59091 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00315P59091 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC00315P59091 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.46□□□□□ -0.74
LINC00315P59091 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00315P59091 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00315P59091 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms