Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
FOXG1P55316 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
FOXG1P55316 MIR769-201ENST00000390225 118 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 AC073150.1-201ENST00000450406 1084 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 AC012618.1-201ENST00000461223 412 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
FOXG1P55316 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXG1P55316 RN7SL574P-201ENST00000581512 297 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 AF254983.2-201ENST00000612331 135 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 NAP1L6-202ENST00000641404 1222 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 FAM45BP-202ENST00000592932 1624 ntBASIC12.68□□□□□ -0.38
FOXG1P55316 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FOXG1P55316 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.68□□□□□ -0.38
FOXG1P55316 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC152010.1-201ENST00000415779 2006 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 LAP3P2-201ENST00000454686 1454 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC015909.3-201ENST00000572855 1794 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 TSPY25P-201ENST00000429463 745 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC024681.1-201ENST00000521917 487 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXG1P55316 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXG1P55316 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXG1P55316 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC021016.3-201ENST00000608367 477 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 AC097724.1-201ENST00000609581 426 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 AC100757.4-201ENST00000626934 759 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXG1P55316 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.67□□□□□ -0.38
FOXG1P55316 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.67□□□□□ -0.38
FOXG1P55316 LINC02486-201ENST00000604157 3000 ntBASIC12.67□□□□□ -0.38
FOXG1P55316 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms