Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HTTP42858 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.67■□□□□ 0.1
HTTP42858 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.67■□□□□ 0.1
HTTP42858 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC15.67■□□□□ 0.1
HTTP42858 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC15.67■□□□□ 0.1
HTTP42858 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.67■□□□□ 0.1
HTTP42858 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC15.67■□□□□ 0.1
HTTP42858 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
HTTP42858 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.67■□□□□ 0.1
HTTP42858 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.67■□□□□ 0.1
HTTP42858 AC093700.1-201ENST00000503348 717 ntBASIC15.67■□□□□ 0.1
HTTP42858 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 AC010202.1-201ENST00000551181 405 ntBASIC15.67■□□□□ 0.1
HTTP42858 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
HTTP42858 AC013268.4-201ENST00000637413 2228 ntBASIC15.67■□□□□ 0.1
HTTP42858 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HTTP42858 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.67■□□□□ 0.1
HTTP42858 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTTP42858 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HTTP42858 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AC018442.1-201ENST00000421439 2061 ntBASIC15.66■□□□□ 0.1
HTTP42858 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 AC004910.1-201ENST00000433493 787 ntBASIC15.66■□□□□ 0.1
HTTP42858 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AC123912.6-201ENST00000612657 315 ntBASIC15.66■□□□□ 0.1
HTTP42858 AC064850.1-201ENST00000413279 1398 ntBASIC15.66■□□□□ 0.1
HTTP42858 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 AC012617.1-204ENST00000586340 2305 ntBASIC15.66■□□□□ 0.1
HTTP42858 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HTTP42858 U3.41-201ENST00000408711 219 ntBASIC15.66■□□□□ 0.1
HTTP42858 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.66■□□□□ 0.1
HTTP42858 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.66■□□□□ 0.1
HTTP42858 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 AC007950.2-201ENST00000615045 2347 ntBASIC15.66■□□□□ 0.1
HTTP42858 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HTTP42858 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.66■□□□□ 0.1
HTTP42858 RN7SL340P-201ENST00000470792 296 ntBASIC15.66■□□□□ 0.1
HTTP42858 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HTTP42858 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC15.66■□□□□ 0.1
HTTP42858 RN7SL202P-201ENST00000584410 262 ntBASIC15.66■□□□□ 0.1
HTTP42858 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AC127002.1-201ENST00000619123 455 ntBASIC15.66■□□□□ 0.1
HTTP42858 AC134878.2-201ENST00000620700 1265 ntBASIC15.66■□□□□ 0.1
HTTP42858 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.66■□□□□ 0.1
HTTP42858 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
HTTP42858 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.65■□□□□ 0.1
HTTP42858 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 ASS1P1-201ENST00000402854 1237 ntBASIC15.65■□□□□ 0.1
HTTP42858 AC010086.2-201ENST00000428616 226 ntBASIC15.65■□□□□ 0.1
HTTP42858 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 RNF7-205ENST00000480908 782 ntTSL 4 BASIC15.65■□□□□ 0.1
HTTP42858 CCNL2P1-201ENST00000512846 969 ntBASIC15.65■□□□□ 0.1
HTTP42858 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC15.65■□□□□ 0.1
HTTP42858 LINC02486-201ENST00000604157 3000 ntBASIC15.65■□□□□ 0.1
HTTP42858 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.65■□□□□ 0.1
HTTP42858 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HTTP42858 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms