Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 PEG13-201ENST00000631594 5667 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 AL512430.1-201ENST00000392575 860 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 BANF1P3-201ENST00000412556 261 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.9□□□□□ -0.34
CHRNB4P30926 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 DUTP3-201ENST00000450025 415 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.9□□□□□ -0.34
CHRNB4P30926 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.9□□□□□ -0.34
CHRNB4P30926 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 AC138894.2-201ENST00000602838 371 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.9□□□□□ -0.34
CHRNB4P30926 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.9□□□□□ -0.34
CHRNB4P30926 HLA-C-210ENST00000640219 976 ntBASIC12.9□□□□□ -0.34
CHRNB4P30926 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CHRNB4P30926 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.9□□□□□ -0.34
CHRNB4P30926 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.9□□□□□ -0.34
CHRNB4P30926 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHRNB4P30926 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHRNB4P30926 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CHRNB4P30926 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CHRNB4P30926 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CHRNB4P30926 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
CHRNB4P30926 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.9□□□□□ -0.35
CHRNB4P30926 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
CHRNB4P30926 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CHRNB4P30926 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.89□□□□□ -0.35
CHRNB4P30926 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 C18orf15-201ENST00000623680 2534 ntBASIC12.89□□□□□ -0.35
CHRNB4P30926 REXO1L2P-201ENST00000425429 2069 ntBASIC12.89□□□□□ -0.35
CHRNB4P30926 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 RPSAP15-201ENST00000448168 861 ntBASIC12.89□□□□□ -0.35
CHRNB4P30926 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.89□□□□□ -0.35
CHRNB4P30926 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.89□□□□□ -0.35
CHRNB4P30926 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHRNB4P30926 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.89□□□□□ -0.35
CHRNB4P30926 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.89□□□□□ -0.35
CHRNB4P30926 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.89□□□□□ -0.35
CHRNB4P30926 AC007881.3-201ENST00000608897 607 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms