Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 DDX12P-201ENST00000432996 2947 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 MIR1233-2-201ENST00000408138 82 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 MIR1233-1-201ENST00000408722 82 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 AL355306.1-201ENST00000415580 579 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 TIMM8BP1-201ENST00000452384 211 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.92□□□□□ -0.34
CD40LGP29965 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
CD40LGP29965 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 AC010327.4-202ENST00000591484 748 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
CD40LGP29965 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 AC005014.1-201ENST00000432006 2976 ntBASIC12.92□□□□□ -0.34
CD40LGP29965 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40LGP29965 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD40LGP29965 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.92□□□□□ -0.34
CD40LGP29965 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.91□□□□□ -0.34
CD40LGP29965 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 SNHG9-202ENST00000564014 471 ntBASIC12.91□□□□□ -0.34
CD40LGP29965 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 AL135744.1-201ENST00000565098 629 ntBASIC12.91□□□□□ -0.34
CD40LGP29965 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.91□□□□□ -0.34
CD40LGP29965 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 AL671883.3-201ENST00000603274 991 ntBASIC12.91□□□□□ -0.34
CD40LGP29965 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.91□□□□□ -0.34
CD40LGP29965 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms