Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.79□□□□□ -0.04
PTPN3P26045 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.79□□□□□ -0.04
PTPN3P26045 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 HSPB1P2-201ENST00000448722 546 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 BNIP3P42-201ENST00000454982 569 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN3P26045 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 AC005962.1-201ENST00000584100 773 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 BNIP3P29-201ENST00000598302 571 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 AC011447.5-201ENST00000616168 564 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 AL157996.1-201ENST00000624684 2299 ntBASIC14.79□□□□□ -0.04
PTPN3P26045 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN3P26045 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN3P26045 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN3P26045 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.78□□□□□ -0.04
PTPN3P26045 FAM21FP-201ENST00000426241 1131 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 FAM58BP-201ENST00000439056 645 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 AC012441.2-201ENST00000444843 739 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 RPSAP36-202ENST00000494591 1261 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 AC010328.2-201ENST00000597698 1111 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.78□□□□□ -0.04
PTPN3P26045 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.78□□□□□ -0.04
PTPN3P26045 AC009884.2-201ENST00000603110 324 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 AC010327.5-201ENST00000586923 3061 ntBASIC14.78□□□□□ -0.04
PTPN3P26045 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.78□□□□□ -0.04
PTPN3P26045 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.78□□□□□ -0.04
PTPN3P26045 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTPN3P26045 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN3P26045 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN3P26045 CYP4F23P-201ENST00000593402 1579 ntBASIC14.77□□□□□ -0.04
PTPN3P26045 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN3P26045 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN3P26045 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
PTPN3P26045 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTPN3P26045 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms