Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 REXO1L1P-201ENST00000379010 6598 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.49□□□□□ -0.41
TNFSF4P23510 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TNFSF4P23510 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 RBM8B-201ENST00000555532 525 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 AC103988.2-201ENST00000561804 725 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.49□□□□□ -0.41
TNFSF4P23510 MIR6720-201ENST00000611664 98 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AL354702.1-201ENST00000442006 1960 ntBASIC12.49□□□□□ -0.41
TNFSF4P23510 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TNFSF4P23510 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 MIR1908-201ENST00000410394 80 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC104306.2-201ENST00000451877 341 ntBASIC12.48□□□□□ -0.41
TNFSF4P23510 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.48□□□□□ -0.41
TNFSF4P23510 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TNFSF4P23510 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.48□□□□□ -0.41
TNFSF4P23510 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.48□□□□□ -0.41
TNFSF4P23510 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms