Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 AC092053.3-201ENST00000641308 4975 ntBASIC15.84■□□□□ 0.13
RFX1P22670 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 AL365209.1-201ENST00000624418 6473 ntBASIC15.84■□□□□ 0.13
RFX1P22670 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 AC079178.1-201ENST00000420915 656 ntBASIC15.84■□□□□ 0.13
RFX1P22670 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX1P22670 FTLP1-201ENST00000449155 526 ntBASIC15.84■□□□□ 0.13
RFX1P22670 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.84■□□□□ 0.13
RFX1P22670 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.84■□□□□ 0.13
RFX1P22670 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 AP003171.2-201ENST00000528208 925 ntBASIC15.84■□□□□ 0.13
RFX1P22670 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RFX1P22670 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.84■□□□□ 0.13
RFX1P22670 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.84■□□□□ 0.13
RFX1P22670 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.84■□□□□ 0.13
RFX1P22670 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.84■□□□□ 0.13
RFX1P22670 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 LINC01230-201ENST00000625222 3017 ntBASIC15.84■□□□□ 0.13
RFX1P22670 AC064801.2-201ENST00000625052 1303 ntBASIC15.84■□□□□ 0.13
RFX1P22670 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.84■□□□□ 0.13
RFX1P22670 AC011498.7-201ENST00000624986 2027 ntBASIC15.84■□□□□ 0.13
RFX1P22670 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFX1P22670 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.83■□□□□ 0.13
RFX1P22670 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.83■□□□□ 0.13
RFX1P22670 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFX1P22670 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RFX1P22670 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RFX1P22670 CYP46A4P-201ENST00000414953 267 ntBASIC15.83■□□□□ 0.12
RFX1P22670 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.83■□□□□ 0.12
RFX1P22670 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 RN7SL713P-201ENST00000582127 302 ntBASIC15.83■□□□□ 0.12
RFX1P22670 SPCS2P2-201ENST00000603270 608 ntBASIC15.83■□□□□ 0.12
RFX1P22670 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RFX1P22670 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFX1P22670 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms