Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ERCC2P18074 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.93□□□□□ -0.02
ERCC2P18074 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.92□□□□□ -0.02
ERCC2P18074 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.92□□□□□ -0.02
ERCC2P18074 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.92□□□□□ -0.02
ERCC2P18074 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.92□□□□□ -0.02
ERCC2P18074 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.92□□□□□ -0.02
ERCC2P18074 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.92□□□□□ -0.02
ERCC2P18074 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.92□□□□□ -0.02
ERCC2P18074 AC124068.2-201ENST00000569473 1109 ntBASIC14.92□□□□□ -0.02
ERCC2P18074 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.92□□□□□ -0.02
ERCC2P18074 AP000346.4-201ENST00000614827 381 ntBASIC14.92□□□□□ -0.02
ERCC2P18074 MIR6752-201ENST00000618442 71 ntBASIC14.92□□□□□ -0.02
ERCC2P18074 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.92□□□□□ -0.02
ERCC2P18074 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
ERCC2P18074 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ERCC2P18074 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.92□□□□□ -0.02
ERCC2P18074 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 MST1P2-201ENST00000457982 2291 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 FAM90A7P-201ENST00000382628 1395 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 FAM90A23P-201ENST00000400136 1395 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 BRWD1P1-201ENST00000401091 371 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.91□□□□□ -0.02
ERCC2P18074 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 HLA-J-204ENST00000495278 958 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.91□□□□□ -0.02
ERCC2P18074 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.91□□□□□ -0.02
ERCC2P18074 AC021016.3-201ENST00000608367 477 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ERCC2P18074 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
ERCC2P18074 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERCC2P18074 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.91□□□□□ -0.02
ERCC2P18074 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms