Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NCK1P16333 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NCK1P16333 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
NCK1P16333 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 AL022313.4-201ENST00000562756 2046 ntBASIC13.78□□□□□ -0.2
NCK1P16333 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.78□□□□□ -0.2
NCK1P16333 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCK1P16333 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCK1P16333 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCK1P16333 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCK1P16333 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCK1P16333 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
NCK1P16333 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCK1P16333 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NCK1P16333 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NCK1P16333 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.77□□□□□ -0.21
NCK1P16333 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.77□□□□□ -0.21
NCK1P16333 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.77□□□□□ -0.21
NCK1P16333 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.77□□□□□ -0.21
NCK1P16333 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.77□□□□□ -0.21
NCK1P16333 AC135782.3-201ENST00000562782 2105 ntBASIC13.77□□□□□ -0.21
NCK1P16333 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 AC015911.4-201ENST00000588022 1070 ntBASIC13.77□□□□□ -0.21
NCK1P16333 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 AL390754.1-201ENST00000619088 582 ntBASIC13.77□□□□□ -0.21
NCK1P16333 AC093028.1-201ENST00000622998 982 ntBASIC13.77□□□□□ -0.21
NCK1P16333 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NCK1P16333 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.77□□□□□ -0.21
NCK1P16333 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCK1P16333 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
NCK1P16333 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NCK1P16333 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCK1P16333 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 FAM86GP-201ENST00000448322 971 ntBASIC13.76□□□□□ -0.21
NCK1P16333 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.76□□□□□ -0.21
NCK1P16333 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.76□□□□□ -0.21
NCK1P16333 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms