Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.02■□□□□ -0
BRAFP15056 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.02■□□□□ -0
BRAFP15056 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRAFP15056 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRAFP15056 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRAFP15056 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRAFP15056 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.02■□□□□ -0
BRAFP15056 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.02■□□□□ -0
BRAFP15056 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRAFP15056 AC106760.1-201ENST00000508690 800 ntBASIC15.02■□□□□ -0
BRAFP15056 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRAFP15056 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.02■□□□□ -0
BRAFP15056 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRAFP15056 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.02■□□□□ -0
BRAFP15056 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.02■□□□□ -0
BRAFP15056 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.02■□□□□ -0
BRAFP15056 BX539320.1-201ENST00000623759 877 ntBASIC15.02■□□□□ -0
BRAFP15056 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.02■□□□□ -0
BRAFP15056 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
BRAFP15056 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 DMBT1P1-203ENST00000636837 4628 ntBASIC15.02□□□□□ -0.01
BRAFP15056 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
BRAFP15056 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 MYADML-201ENST00000474610 2147 ntBASIC15.02□□□□□ -0.01
BRAFP15056 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 AC011840.2-201ENST00000563063 1520 ntBASIC15.02□□□□□ -0.01
BRAFP15056 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.02□□□□□ -0.01
BRAFP15056 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRAFP15056 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 AC092933.1-201ENST00000393644 945 ntBASIC15.01□□□□□ -0.01
BRAFP15056 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 ATP5G2P4-201ENST00000442175 420 ntBASIC15.01□□□□□ -0.01
BRAFP15056 SNX29P1-201ENST00000548357 1007 ntBASIC15.01□□□□□ -0.01
BRAFP15056 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.01□□□□□ -0.01
BRAFP15056 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.01□□□□□ -0.01
BRAFP15056 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.01□□□□□ -0.01
BRAFP15056 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 AP005019.2-201ENST00000615104 511 ntBASIC15.01□□□□□ -0.01
BRAFP15056 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
BRAFP15056 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 AC019294.4-201ENST00000561777 2905 ntBASIC15.01□□□□□ -0.01
BRAFP15056 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.01□□□□□ -0.01
BRAFP15056 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRAFP15056 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRAFP15056 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
BRAFP15056 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
BRAFP15056 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRAFP15056 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRAFP15056 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15□□□□□ -0.01
BRAFP15056 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRAFP15056 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15□□□□□ -0.01
BRAFP15056 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms