Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
DEFA4P12838 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 HLA-K-203ENST00000430151 1046 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 ENPP7P5-201ENST00000541031 1031 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.91□□□□□ -0.5
DEFA4P12838 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 MIR497HG-202ENST00000572453 3838 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 LINC02560-201ENST00000596379 459 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 TMEM261P1-201ENST00000604899 340 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
DEFA4P12838 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 KRT8P14-201ENST00000414254 1442 ntBASIC11.91□□□□□ -0.5
DEFA4P12838 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.91□□□□□ -0.5
DEFA4P12838 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
DEFA4P12838 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
DEFA4P12838 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
DEFA4P12838 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 TCAF1P1-201ENST00000414990 2232 ntBASIC11.9□□□□□ -0.5
DEFA4P12838 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.9□□□□□ -0.5
DEFA4P12838 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 AL162726.2-201ENST00000438986 1017 ntBASIC11.9□□□□□ -0.5
DEFA4P12838 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.9□□□□□ -0.5
DEFA4P12838 TPT1P11-201ENST00000458482 498 ntBASIC11.9□□□□□ -0.5
DEFA4P12838 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.9□□□□□ -0.5
DEFA4P12838 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
DEFA4P12838 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 AP005019.2-201ENST00000615104 511 ntBASIC11.9□□□□□ -0.5
DEFA4P12838 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms