Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 AL627231.1-201ENST00000394467 1125 ntBASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 RN7SL67P-201ENST00000492147 296 ntBASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 AC051619.9-201ENST00000623237 597 ntBASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AC104581.4-201ENST00000623126 3052 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 NOC2LP1-201ENST00000450578 752 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 PGAM1P5-201ENST00000548011 764 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AL109837.1-201ENST00000603272 613 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AC103810.10-201ENST00000606504 343 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 LINC01165-201ENST00000445190 1623 ntBASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40ALP0C0E4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms