Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 KRT17P4-201ENST00000429445 819 ntBASIC16.19■□□□□ 0.18
HOXC6P09630 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.19■□□□□ 0.18
HOXC6P09630 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.19■□□□□ 0.18
HOXC6P09630 PGAM1P12-201ENST00000505622 748 ntBASIC16.19■□□□□ 0.18
HOXC6P09630 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.19■□□□□ 0.18
HOXC6P09630 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.19■□□□□ 0.18
HOXC6P09630 AC104506.1-201ENST00000609247 429 ntBASIC16.19■□□□□ 0.18
HOXC6P09630 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HOXC6P09630 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.19■□□□□ 0.18
HOXC6P09630 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC6P09630 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC6P09630 AC018442.1-201ENST00000421439 2061 ntBASIC16.18■□□□□ 0.18
HOXC6P09630 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 COX20P1-201ENST00000366529 357 ntBASIC16.18■□□□□ 0.18
HOXC6P09630 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC6P09630 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
HOXC6P09630 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC6P09630 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 KRT8P2-201ENST00000556193 944 ntBASIC16.18■□□□□ 0.18
HOXC6P09630 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 FGD5P1-202ENST00000614866 2498 ntBASIC16.18■□□□□ 0.18
HOXC6P09630 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC6P09630 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC6P09630 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC6P09630 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC6P09630 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC6P09630 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms