Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.61■□□□□ 0.09
CHRNA1P02708 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 PPP1R2P4-201ENST00000424051 595 ntBASIC15.61■□□□□ 0.09
CHRNA1P02708 AL157792.1-201ENST00000488281 530 ntBASIC15.61■□□□□ 0.09
CHRNA1P02708 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.61■□□□□ 0.09
CHRNA1P02708 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CHRNA1P02708 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC011498.7-201ENST00000624986 2027 ntBASIC15.61■□□□□ 0.09
CHRNA1P02708 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CHRNA1P02708 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 AC232323.1-201ENST00000540724 2099 ntBASIC15.61■□□□□ 0.09
CHRNA1P02708 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRNA1P02708 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRNA1P02708 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CHRNA1P02708 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.61■□□□□ 0.09
CHRNA1P02708 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.6■□□□□ 0.09
CHRNA1P02708 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.6■□□□□ 0.09
CHRNA1P02708 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CHRNA1P02708 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CHRNA1P02708 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.6■□□□□ 0.09
CHRNA1P02708 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 RPL35P9-201ENST00000446059 350 ntBASIC15.6■□□□□ 0.09
CHRNA1P02708 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.6■□□□□ 0.09
CHRNA1P02708 AC022447.6-201ENST00000515522 438 ntBASIC15.6■□□□□ 0.09
CHRNA1P02708 KLF17P1-201ENST00000547105 1126 ntBASIC15.6■□□□□ 0.09
CHRNA1P02708 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.6■□□□□ 0.09
CHRNA1P02708 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 AC006158.1-201ENST00000610661 249 ntBASIC15.6■□□□□ 0.09
CHRNA1P02708 AC002044.2-201ENST00000624910 970 ntBASIC15.6■□□□□ 0.09
CHRNA1P02708 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CHRNA1P02708 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHRNA1P02708 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CHRNA1P02708 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CHRNA1P02708 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHRNA1P02708 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRNA1P02708 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRNA1P02708 LINC02228-204ENST00000642115 2962 ntBASIC15.59■□□□□ 0.09
CHRNA1P02708 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.59■□□□□ 0.09
CHRNA1P02708 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHRNA1P02708 BX679664.3-201ENST00000414070 555 ntBASIC15.59■□□□□ 0.09
CHRNA1P02708 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms