Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC006372.4-201ENST00000624122 1543 ntBASIC15.91■□□□□ 0.14
CD4P01730 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.91■□□□□ 0.14
CD4P01730 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.91■□□□□ 0.14
CD4P01730 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 RN7SL357P-201ENST00000581065 298 ntBASIC15.91■□□□□ 0.14
CD4P01730 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.91■□□□□ 0.14
CD4P01730 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 AL591471.1-201ENST00000621855 229 ntBASIC15.91■□□□□ 0.14
CD4P01730 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.91■□□□□ 0.14
CD4P01730 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD4P01730 AC006504.5-208ENST00000588784 2401 ntBASIC15.91■□□□□ 0.14
CD4P01730 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.91■□□□□ 0.14
CD4P01730 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CD4P01730 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD4P01730 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 OR5BD1P-201ENST00000532527 817 ntBASIC15.9■□□□□ 0.14
CD4P01730 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.9■□□□□ 0.14
CD4P01730 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 AC011471.3-201ENST00000623576 402 ntBASIC15.9■□□□□ 0.14
CD4P01730 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.9■□□□□ 0.14
CD4P01730 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CD4P01730 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD4P01730 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD4P01730 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CD4P01730 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD4P01730 AC021305.1-201ENST00000520656 1514 ntBASIC15.89■□□□□ 0.13
CD4P01730 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 AC144831.1-201ENST00000573312 2656 ntBASIC15.89■□□□□ 0.13
CD4P01730 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.89■□□□□ 0.13
CD4P01730 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD4P01730 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.89■□□□□ 0.13
CD4P01730 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.89■□□□□ 0.13
CD4P01730 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms