Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 AL365209.1-201ENST00000624418 6473 ntBASIC14.11□□□□□ -0.15
TNFP01375 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 AC069218.1-201ENST00000435269 762 ntBASIC14.11□□□□□ -0.15
TNFP01375 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFP01375 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.11□□□□□ -0.15
TNFP01375 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.11□□□□□ -0.15
TNFP01375 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFP01375 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFP01375 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TNFP01375 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFP01375 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TNFP01375 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 AC074138.1-201ENST00000611182 1303 ntBASIC14.11□□□□□ -0.15
TNFP01375 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFP01375 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 INTS4P1-203ENST00000641008 3683 ntBASIC14.1□□□□□ -0.15
TNFP01375 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFP01375 AC073869.2-201ENST00000417338 1026 ntBASIC14.1□□□□□ -0.15
TNFP01375 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFP01375 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 ALG1L13P-202ENST00000519320 584 ntBASIC14.1□□□□□ -0.15
TNFP01375 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFP01375 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFP01375 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 AC009560.1-201ENST00000620208 434 ntBASIC14.1□□□□□ -0.15
TNFP01375 AL805961.1-201ENST00000642026 753 ntBASIC14.1□□□□□ -0.15
TNFP01375 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFP01375 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFP01375 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TNFP01375 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFP01375 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFP01375 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms