Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1AO95602 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1AO95602 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.46■□□□□ 0.87
POLR1AO95602 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 OR52M2P-201ENST00000414298 959 ntBASIC20.46■□□□□ 0.87
POLR1AO95602 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC20.46■□□□□ 0.87
POLR1AO95602 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1AO95602 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
POLR1AO95602 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR1AO95602 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR1AO95602 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1AO95602 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1AO95602 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
POLR1AO95602 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.45■□□□□ 0.87
POLR1AO95602 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.45■□□□□ 0.86
POLR1AO95602 RN7SL788P-201ENST00000460504 316 ntBASIC20.45■□□□□ 0.86
POLR1AO95602 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.45■□□□□ 0.86
POLR1AO95602 PSME2-217ENST00000615264 874 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 PSME2-218ENST00000630027 185 ntTSL 3 BASIC20.45■□□□□ 0.86
POLR1AO95602 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
POLR1AO95602 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
POLR1AO95602 TUBB8P4-201ENST00000511806 1324 ntBASIC20.45■□□□□ 0.86
POLR1AO95602 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
POLR1AO95602 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1AO95602 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.44■□□□□ 0.86
POLR1AO95602 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 PGAM1P11-201ENST00000416729 680 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 AL080243.1-201ENST00000423293 1060 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 AL161932.2-201ENST00000435436 679 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 AC053503.3-201ENST00000448375 114 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1AO95602 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 AC006116.2-201ENST00000589958 988 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.44■□□□□ 0.86
POLR1AO95602 AC005274.1-201ENST00000623460 802 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 AL357143.1-203ENST00000639750 881 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
POLR1AO95602 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 GRK6P1-201ENST00000400595 1711 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1AO95602 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1AO95602 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC20.44■□□□□ 0.86
POLR1AO95602 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1AO95602 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1AO95602 SRP14-208ENST00000560773 468 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 AC120498.7-201ENST00000562876 330 ntBASIC20.44■□□□□ 0.86
POLR1AO95602 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1AO95602 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.44■□□□□ 0.86
POLR1AO95602 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR1AO95602 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms