Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AC010328.2-201ENST00000597698 1111 ntBASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AC017083.2-201ENST00000608069 979 ntBASIC12.8□□□□□ -0.36
NPIPB4C9JG80 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AL590824.1-201ENST00000403828 1349 ntBASIC12.8□□□□□ -0.36
NPIPB4C9JG80 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPB4C9JG80 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 POM121L10P-201ENST00000436994 1285 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 HLA-J-204ENST00000495278 958 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 BNIP3P13-201ENST00000599968 566 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 AC010327.5-201ENST00000586923 3061 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 FAM90A7P-201ENST00000382628 1395 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 FAM90A23P-201ENST00000400136 1395 ntBASIC12.79□□□□□ -0.36
NPIPB4C9JG80 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPB4C9JG80 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPB4C9JG80 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms