Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 GNG10P1-201ENST00000452289 199 ntBASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AC063952.3-201ENST00000467756 308 ntBASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ABHD17AP9-201ENST00000561925 548 ntBASIC14.12□□□□□ -0.15
C4orf47A7E2U8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 AL672207.1-201ENST00000328462 1570 ntBASIC14.12□□□□□ -0.15
C4orf47A7E2U8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
C4orf47A7E2U8 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C4orf47A7E2U8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 MIR645-201ENST00000385283 94 ntBASIC14.11□□□□□ -0.15
C4orf47A7E2U8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AC018638.5-201ENST00000450885 754 ntBASIC14.11□□□□□ -0.15
C4orf47A7E2U8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C4orf47A7E2U8 GOLGA2P7-209ENST00000560408 745 ntBASIC14.11□□□□□ -0.15
C4orf47A7E2U8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms