Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM88BA6NKF7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 SALL4P6-201ENST00000429385 1691 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 U3.5-201ENST00000363448 216 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 RNF7-205ENST00000480908 782 ntTSL 4 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 AC112250.1-201ENST00000504640 745 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 OR52V1P-201ENST00000515557 898 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 AC010202.1-201ENST00000551181 405 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 FAM187B2P-201ENST00000577135 713 ntBASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM88BA6NKF7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 ABCD1P3-201ENST00000562927 605 ntBASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 CICP23-201ENST00000605013 2741 ntBASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM88BA6NKF7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 PHBP10-201ENST00000416467 784 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 AC092865.2-201ENST00000439409 971 ntBASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM88BA6NKF7 UGT1A12P-201ENST00000447084 853 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms