Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AP006288.1-201ENST00000446065 395 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AC097493.3-201ENST00000509725 367 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 SNHG9-202ENST00000564014 471 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AP001160.2-201ENST00000596071 487 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AC008738.7-201ENST00000609744 511 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 LRRC59-203ENST00000576448 1531 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 CLUHP2-201ENST00000426660 1303 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC023310.3-201ENST00000557027 670 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC027237.1-201ENST00000560942 655 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC100756.1-201ENST00000562736 682 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC138749.3-201ENST00000567691 622 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC116165.1-201ENST00000611806 668 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 PDIA3P1-201ENST00000471856 1510 ntBASIC12.65□□□□□ -0.38
SHISA3A0PJX4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.65□□□□□ -0.38
SHISA3A0PJX4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SHISA3A0PJX4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms