Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 KHSRPP1-201ENST00000427983 1768 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AL118506.1-201ENST00000601296 3082 ntBASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AC103988.2-201ENST00000561804 725 ntBASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PTPRVP-205ENST00000641549 5067 ntBASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 AL805961.2-201ENST00000642139 4817 ntBASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAV18A0A075B6X5 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 AC135782.3-201ENST00000562782 2105 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 AC139712.1-201ENST00000378256 1875 ntBASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV18A0A075B6X5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms