Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 AC097381.1-201ENST00000429019 1296 ntBASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 AC027682.1-201ENST00000562846 899 ntBASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGA9Q9Y5G4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 CA15P2-201ENST00000611168 834 ntBASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA9Q9Y5G4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 AC131274.2-201ENST00000580697 1507 ntBASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.16■□□□□ 0.98
PCDHGA9Q9Y5G4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA9Q9Y5G4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGA9Q9Y5G4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 AC099791.2-201ENST00000605725 427 ntBASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGA9Q9Y5G4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 AL139125.2-201ENST00000623134 1869 ntBASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHGA9Q9Y5G4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA9Q9Y5G4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 AC241377.3-202ENST00000626088 1088 ntBASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 AC241585.3-202ENST00000628937 1088 ntBASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 AC245100.8-202ENST00000629247 1058 ntBASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA9Q9Y5G4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 AC009102.2-201ENST00000606772 1639 ntBASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA9Q9Y5G4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms