Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB2Q9Y5E7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB2Q9Y5E7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.87■■□□□ 1.57
PCDHB2Q9Y5E7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
PCDHB2Q9Y5E7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB2Q9Y5E7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 AL161729.1-201ENST00000604104 1402 ntBASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 AC135279.3-201ENST00000610945 1311 ntBASIC24.86■■□□□ 1.57
PCDHB2Q9Y5E7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 AC009102.2-201ENST00000606772 1639 ntBASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB2Q9Y5E7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHB2Q9Y5E7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDHB2Q9Y5E7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHB2Q9Y5E7 AC024257.2-201ENST00000549699 147 ntBASIC24.84■■□□□ 1.57
PCDHB2Q9Y5E7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB2Q9Y5E7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB2Q9Y5E7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB2Q9Y5E7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHB2Q9Y5E7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
PCDHB2Q9Y5E7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHB2Q9Y5E7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 DUX4L19-201ENST00000557448 1267 ntBASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHB2Q9Y5E7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 AL031432.3-201ENST00000607698 485 ntBASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDHB2Q9Y5E7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
PCDHB2Q9Y5E7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PCDHB2Q9Y5E7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB2Q9Y5E7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHB2Q9Y5E7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 AC142381.2-201ENST00000566120 298 ntBASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 AC092171.4-201ENST00000609130 632 ntBASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHB2Q9Y5E7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 SUDS3P1-201ENST00000505831 966 ntBASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 AC099791.2-201ENST00000605725 427 ntBASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 SYT6-210ENST00000641643 1587 ntBASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PCDHB2Q9Y5E7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB2Q9Y5E7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms