Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
YIPF1Q9Y548 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
YIPF1Q9Y548 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.89■■□□□ 1.42
YIPF1Q9Y548 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
YIPF1Q9Y548 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
YIPF1Q9Y548 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
YIPF1Q9Y548 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
YIPF1Q9Y548 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
YIPF1Q9Y548 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
YIPF1Q9Y548 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.87■■□□□ 1.41
YIPF1Q9Y548 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.87■■□□□ 1.41
YIPF1Q9Y548 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
YIPF1Q9Y548 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.87■■□□□ 1.41
YIPF1Q9Y548 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 RARRES2P6-201ENST00000567333 442 ntBASIC23.86■■□□□ 1.41
YIPF1Q9Y548 AC136469.2-201ENST00000623944 1028 ntBASIC23.86■■□□□ 1.41
YIPF1Q9Y548 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 AC142381.3-201ENST00000568208 1670 ntBASIC23.86■■□□□ 1.41
YIPF1Q9Y548 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YIPF1Q9Y548 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.85■■□□□ 1.41
YIPF1Q9Y548 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 AC138932.3-201ENST00000567634 1902 ntBASIC23.85■■□□□ 1.41
YIPF1Q9Y548 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 AC027682.1-201ENST00000562846 899 ntBASIC23.85■■□□□ 1.41
YIPF1Q9Y548 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
YIPF1Q9Y548 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 MIR3181-201ENST00000578512 73 ntBASIC23.84■■□□□ 1.41
YIPF1Q9Y548 CA15P2-201ENST00000611168 834 ntBASIC23.84■■□□□ 1.41
YIPF1Q9Y548 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.84■■□□□ 1.41
YIPF1Q9Y548 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.83■■□□□ 1.41
YIPF1Q9Y548 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
YIPF1Q9Y548 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
YIPF1Q9Y548 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 RASA4CP-201ENST00000424092 1398 ntBASIC23.82■■□□□ 1.4
YIPF1Q9Y548 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
YIPF1Q9Y548 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 AC008764.7-201ENST00000593779 1081 ntBASIC23.81■■□□□ 1.4
YIPF1Q9Y548 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
YIPF1Q9Y548 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
YIPF1Q9Y548 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 AC099791.1-201ENST00000416440 715 ntBASIC23.79■■□□□ 1.4
YIPF1Q9Y548 AC026271.2-201ENST00000428091 497 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms