Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.62■■□□□ 1.69
KDM3AQ9Y4C1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.61■■□□□ 1.69
KDM3AQ9Y4C1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM3AQ9Y4C1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KDM3AQ9Y4C1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
KDM3AQ9Y4C1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KDM3AQ9Y4C1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
KDM3AQ9Y4C1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 AC110285.6-201ENST00000617652 491 ntBASIC25.58■■□□□ 1.69
KDM3AQ9Y4C1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
KDM3AQ9Y4C1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.58■■□□□ 1.68
KDM3AQ9Y4C1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
KDM3AQ9Y4C1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
KDM3AQ9Y4C1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.56■■□□□ 1.68
KDM3AQ9Y4C1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
KDM3AQ9Y4C1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KDM3AQ9Y4C1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KDM3AQ9Y4C1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
KDM3AQ9Y4C1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
KDM3AQ9Y4C1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.54■■□□□ 1.68
KDM3AQ9Y4C1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KDM3AQ9Y4C1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
KDM3AQ9Y4C1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KDM3AQ9Y4C1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KDM3AQ9Y4C1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
KDM3AQ9Y4C1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
KDM3AQ9Y4C1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.51■■□□□ 1.67
KDM3AQ9Y4C1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms