Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
IFT52Q9Y366 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.13■□□□□ 0.97
IFT52Q9Y366 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT52Q9Y366 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT52Q9Y366 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IFT52Q9Y366 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.13■□□□□ 0.97
IFT52Q9Y366 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.13■□□□□ 0.97
IFT52Q9Y366 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT52Q9Y366 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
IFT52Q9Y366 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT52Q9Y366 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.12■□□□□ 0.97
IFT52Q9Y366 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.12■□□□□ 0.97
IFT52Q9Y366 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.12■□□□□ 0.97
IFT52Q9Y366 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT52Q9Y366 AC131274.2-201ENST00000580697 1507 ntBASIC21.12■□□□□ 0.97
IFT52Q9Y366 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT52Q9Y366 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
IFT52Q9Y366 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT52Q9Y366 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT52Q9Y366 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 THA1P-201ENST00000590384 1145 ntBASIC21.11■□□□□ 0.97
IFT52Q9Y366 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT52Q9Y366 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
IFT52Q9Y366 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IFT52Q9Y366 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IFT52Q9Y366 AC010980.1-201ENST00000587192 1142 ntBASIC21.1■□□□□ 0.97
IFT52Q9Y366 PVT1_1.1-201ENST00000615125 194 ntBASIC21.1■□□□□ 0.97
IFT52Q9Y366 AC012354.3-201ENST00000623734 483 ntBASIC21.1■□□□□ 0.97
IFT52Q9Y366 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IFT52Q9Y366 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IFT52Q9Y366 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IFT52Q9Y366 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
IFT52Q9Y366 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT52Q9Y366 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
IFT52Q9Y366 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT52Q9Y366 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.08■□□□□ 0.97
IFT52Q9Y366 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT52Q9Y366 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.08■□□□□ 0.97
IFT52Q9Y366 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.08■□□□□ 0.97
IFT52Q9Y366 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.08■□□□□ 0.96
IFT52Q9Y366 ALDH1A3-203ENST00000557963 1670 ntBASIC21.08■□□□□ 0.96
IFT52Q9Y366 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.08■□□□□ 0.96
IFT52Q9Y366 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
IFT52Q9Y366 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT52Q9Y366 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
IFT52Q9Y366 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IFT52Q9Y366 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IFT52Q9Y366 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IFT52Q9Y366 MIR4281-201ENST00000580852 62 ntBASIC21.06■□□□□ 0.96
IFT52Q9Y366 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IFT52Q9Y366 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT52Q9Y366 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT52Q9Y366 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MIR4508-201ENST00000584178 70 ntBASIC21.05■□□□□ 0.96
IFT52Q9Y366 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms