Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 AL022069.1-201ENST00000568025 1636 ntBASIC20.74■□□□□ 0.91
TRAPPC4Q9Y296 LINC00565-201ENST00000562710 2331 ntBASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 BX664725.1-201ENST00000438252 379 ntBASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 Z92544.1-202ENST00000571933 1220 ntBASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAPPC4Q9Y296 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAPPC4Q9Y296 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 AL024507.2-201ENST00000606070 2574 ntBASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAPPC4Q9Y296 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 AL451085.2-201ENST00000605085 799 ntBASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 AC021242.3-201ENST00000607598 1377 ntBASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAPPC4Q9Y296 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 AC009299.2-201ENST00000482477 511 ntBASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAPPC4Q9Y296 AC131274.2-201ENST00000580697 1507 ntBASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 AC004812.2-201ENST00000611079 2094 ntBASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAPPC4Q9Y296 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAPPC4Q9Y296 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 ABCB10P4-201ENST00000566803 2184 ntBASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 AC004448.1-201ENST00000458332 883 ntBASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 KRT125P-201ENST00000546827 989 ntBASIC20.66■□□□□ 0.9
TRAPPC4Q9Y296 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms