Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 AC131274.2-201ENST00000580697 1507 ntBASIC20.16■□□□□ 0.82
COPS3Q9UNS2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPS3Q9UNS2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COPS3Q9UNS2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.14■□□□□ 0.81
COPS3Q9UNS2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPS3Q9UNS2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 KRT18P60-201ENST00000312876 1297 ntBASIC20.12■□□□□ 0.81
COPS3Q9UNS2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPS3Q9UNS2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.11■□□□□ 0.81
COPS3Q9UNS2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 AC011551.1-201ENST00000614101 683 ntBASIC20.11■□□□□ 0.81
COPS3Q9UNS2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPS3Q9UNS2 EP400NL-214ENST00000641289 2402 ntBASIC20.11■□□□□ 0.81
COPS3Q9UNS2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPS3Q9UNS2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 HSD17B1P1-201ENST00000590052 955 ntBASIC20.09■□□□□ 0.81
COPS3Q9UNS2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
COPS3Q9UNS2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms