Protein–RNA interactions for Protein: Q9UGQ2

CACFD1, Calcium channel flower homolog, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1Q9UGQ2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CACFD1Q9UGQ2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 MIR639-201ENST00000384974 98 ntBASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.54■□□□□ 0.56
CACFD1Q9UGQ2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 PKD1P6-201ENST00000343738 4769 ntBASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 AC026202.3-201ENST00000600805 1127 ntBASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACFD1Q9UGQ2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 GUSBP5-202ENST00000510805 1989 ntBASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACFD1Q9UGQ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.52■□□□□ 0.55
CACFD1Q9UGQ2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CACFD1Q9UGQ2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CACFD1Q9UGQ2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACFD1Q9UGQ2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACFD1Q9UGQ2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 ECEL1P1-201ENST00000373592 1742 ntBASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACFD1Q9UGQ2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACFD1Q9UGQ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACFD1Q9UGQ2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms