Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF7Q9UBF6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF7Q9UBF6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 AL117332.1-201ENST00000622628 974 ntBASIC19.1■□□□□ 0.65
RNF7Q9UBF6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF7Q9UBF6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 MIR3621-201ENST00000580529 85 ntBASIC19.09■□□□□ 0.65
RNF7Q9UBF6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF7Q9UBF6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF7Q9UBF6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF7Q9UBF6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF7Q9UBF6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF7Q9UBF6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF7Q9UBF6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 AC131212.1-201ENST00000613771 668 ntBASIC19.08■□□□□ 0.64
RNF7Q9UBF6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RNF7Q9UBF6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF7Q9UBF6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF7Q9UBF6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF7Q9UBF6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF7Q9UBF6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF7Q9UBF6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF7Q9UBF6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF7Q9UBF6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF7Q9UBF6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF7Q9UBF6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF7Q9UBF6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF7Q9UBF6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF7Q9UBF6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms