Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 GPX1-201ENST00000419349 1106 ntBASIC19.4■□□□□ 0.7
RDH8Q9NYR8 MIR4449-201ENST00000578365 66 ntBASIC19.4■□□□□ 0.7
RDH8Q9NYR8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RDH8Q9NYR8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RDH8Q9NYR8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RDH8Q9NYR8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RDH8Q9NYR8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH8Q9NYR8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 KRT18P10-201ENST00000388836 1287 ntBASIC19.38■□□□□ 0.69
RDH8Q9NYR8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH8Q9NYR8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 AC026202.3-201ENST00000600805 1127 ntBASIC19.37■□□□□ 0.69
RDH8Q9NYR8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RDH8Q9NYR8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RDH8Q9NYR8 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.36■□□□□ 0.69
RDH8Q9NYR8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 FOXO3B-201ENST00000395675 1928 ntBASIC19.35■□□□□ 0.69
RDH8Q9NYR8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH8Q9NYR8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH8Q9NYR8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RDH8Q9NYR8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH8Q9NYR8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH8Q9NYR8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH8Q9NYR8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RDH8Q9NYR8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH8Q9NYR8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH8Q9NYR8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms