Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.81
RBM28Q9NW13 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
RBM28Q9NW13 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RBM28Q9NW13 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RBM28Q9NW13 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.38■■□□□ 1.81
RBM28Q9NW13 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.38■■□□□ 1.81
RBM28Q9NW13 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RBM28Q9NW13 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RBM28Q9NW13 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
RBM28Q9NW13 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.37■■□□□ 1.81
RBM28Q9NW13 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RBM28Q9NW13 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.37■■□□□ 1.81
RBM28Q9NW13 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.37■■□□□ 1.81
RBM28Q9NW13 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RBM28Q9NW13 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RBM28Q9NW13 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RBM28Q9NW13 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RBM28Q9NW13 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RBM28Q9NW13 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RBM28Q9NW13 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.35■■□□□ 1.81
RBM28Q9NW13 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RBM28Q9NW13 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RBM28Q9NW13 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RBM28Q9NW13 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RBM28Q9NW13 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.34■■□□□ 1.81
RBM28Q9NW13 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RBM28Q9NW13 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RBM28Q9NW13 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RBM28Q9NW13 AL117332.1-201ENST00000622628 974 ntBASIC26.34■■□□□ 1.81
RBM28Q9NW13 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RBM28Q9NW13 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RBM28Q9NW13 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.33■■□□□ 1.81
RBM28Q9NW13 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RBM28Q9NW13 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.33■■□□□ 1.81
RBM28Q9NW13 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RBM28Q9NW13 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.33■■□□□ 1.81
RBM28Q9NW13 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RBM28Q9NW13 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RBM28Q9NW13 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.32■■□□□ 1.8
RBM28Q9NW13 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RBM28Q9NW13 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RBM28Q9NW13 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.32■■□□□ 1.8
RBM28Q9NW13 MIR3621-201ENST00000580529 85 ntBASIC26.32■■□□□ 1.8
RBM28Q9NW13 AL356740.2-201ENST00000601559 647 ntBASIC26.32■■□□□ 1.8
RBM28Q9NW13 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RBM28Q9NW13 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RBM28Q9NW13 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RBM28Q9NW13 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RBM28Q9NW13 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.31■■□□□ 1.8
RBM28Q9NW13 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.31■■□□□ 1.8
RBM28Q9NW13 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.31■■□□□ 1.8
RBM28Q9NW13 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RBM28Q9NW13 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RBM28Q9NW13 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.31■■□□□ 1.8
RBM28Q9NW13 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.31■■□□□ 1.8
RBM28Q9NW13 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RBM28Q9NW13 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RBM28Q9NW13 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RBM28Q9NW13 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.3■■□□□ 1.8
RBM28Q9NW13 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.3■■□□□ 1.8
RBM28Q9NW13 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RBM28Q9NW13 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RBM28Q9NW13 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.29■■□□□ 1.8
RBM28Q9NW13 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.29■■□□□ 1.8
RBM28Q9NW13 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.29■■□□□ 1.8
RBM28Q9NW13 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RBM28Q9NW13 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RBM28Q9NW13 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RBM28Q9NW13 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.28■■□□□ 1.8
RBM28Q9NW13 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.28■■□□□ 1.8
RBM28Q9NW13 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.28■■□□□ 1.8
RBM28Q9NW13 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RBM28Q9NW13 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RBM28Q9NW13 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RBM28Q9NW13 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RBM28Q9NW13 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RBM28Q9NW13 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RBM28Q9NW13 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RBM28Q9NW13 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RBM28Q9NW13 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RBM28Q9NW13 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.26■■□□□ 1.79
RBM28Q9NW13 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.26■■□□□ 1.79
RBM28Q9NW13 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RBM28Q9NW13 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms