Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.32■■□□□ 1.8
FBXO28Q9NVF7 AC138932.3-201ENST00000567634 1902 ntBASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 AC026271.2-201ENST00000428091 497 ntBASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
FBXO28Q9NVF7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 AC091305.1-201ENST00000479476 895 ntBASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 AC011298.3-201ENST00000615796 283 ntBASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.3■■□□□ 1.8
FBXO28Q9NVF7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 AP003733.4-201ENST00000623785 1697 ntBASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO28Q9NVF7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 AL138724.1-201ENST00000606771 1088 ntBASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 AC241377.3-202ENST00000626088 1088 ntBASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 AC241585.3-202ENST00000628937 1088 ntBASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 AC245100.8-202ENST00000629247 1058 ntBASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO28Q9NVF7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 MIR3181-201ENST00000578512 73 ntBASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 AC008764.7-201ENST00000593779 1081 ntBASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 CA15P2-201ENST00000611168 834 ntBASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 AC009086.3-201ENST00000623486 1008 ntBASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO28Q9NVF7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
FBXO28Q9NVF7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
FBXO28Q9NVF7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 AC136469.2-201ENST00000623944 1028 ntBASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO28Q9NVF7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 RASA4CP-201ENST00000424092 1398 ntBASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO28Q9NVF7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO28Q9NVF7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO28Q9NVF7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO28Q9NVF7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.22■■□□□ 1.79
FBXO28Q9NVF7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO28Q9NVF7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 AC099791.1-201ENST00000416440 715 ntBASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 AC027682.1-201ENST00000562846 899 ntBASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.21■■□□□ 1.79
FBXO28Q9NVF7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms