Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 SNX5-217ENST00000606557 1087 ntBASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 AC092068.2-201ENST00000590491 1708 ntBASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LRRC40Q9H9A6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC40Q9H9A6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC40Q9H9A6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23■■□□□ 1.27
LRRC40Q9H9A6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRRC40Q9H9A6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC40Q9H9A6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23■■□□□ 1.27
LRRC40Q9H9A6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC40Q9H9A6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
LRRC40Q9H9A6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC40Q9H9A6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 BX664725.1-201ENST00000438252 379 ntBASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC40Q9H9A6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 AC021242.3-201ENST00000607598 1377 ntBASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC40Q9H9A6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.95■■□□□ 1.26
LRRC40Q9H9A6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC40Q9H9A6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.95■■□□□ 1.26
LRRC40Q9H9A6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.95■■□□□ 1.26
LRRC40Q9H9A6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 RARRES2P1-201ENST00000474487 481 ntBASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC40Q9H9A6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC40Q9H9A6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms