Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB1BQ9H0U4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB1BQ9H0U4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB1BQ9H0U4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 AC011298.3-201ENST00000615796 283 ntBASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB1BQ9H0U4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 SUDS3P1-201ENST00000505831 966 ntBASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 AC009086.3-201ENST00000623486 1008 ntBASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB1BQ9H0U4 AC138932.3-201ENST00000567634 1902 ntBASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 AL031432.3-201ENST00000607698 485 ntBASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 AC135731.1-201ENST00000569415 2548 ntBASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB1BQ9H0U4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 MIR4767-201ENST00000582827 78 ntBASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB1BQ9H0U4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
RAB1BQ9H0U4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.14■□□□□ 0.66
RAB1BQ9H0U4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
RAB1BQ9H0U4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 AF213884.3-201ENST00000563833 479 ntBASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAB1BQ9H0U4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms