Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP54Q96N23 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP54Q96N23 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 AC006455.2-201ENST00000429931 906 ntBASIC22.55■■□□□ 1.2
CFAP54Q96N23 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP54Q96N23 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP54Q96N23 MIR6084-201ENST00000622012 110 ntBASIC22.55■■□□□ 1.2
CFAP54Q96N23 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP54Q96N23 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP54Q96N23 GUSBP6-202ENST00000438529 1198 ntBASIC22.54■■□□□ 1.2
CFAP54Q96N23 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP54Q96N23 AC009102.2-201ENST00000606772 1639 ntBASIC22.54■■□□□ 1.2
CFAP54Q96N23 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.54■■□□□ 1.2
CFAP54Q96N23 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP54Q96N23 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.54■■□□□ 1.2
CFAP54Q96N23 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.54■■□□□ 1.2
CFAP54Q96N23 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP54Q96N23 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP54Q96N23 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CFAP54Q96N23 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CFAP54Q96N23 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP54Q96N23 MIR3181-201ENST00000578512 73 ntBASIC22.54■■□□□ 1.2
CFAP54Q96N23 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP54Q96N23 AC012414.1-201ENST00000556676 535 ntBASIC22.53■■□□□ 1.2
CFAP54Q96N23 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP54Q96N23 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP54Q96N23 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CFAP54Q96N23 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP54Q96N23 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP54Q96N23 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.52■■□□□ 1.2
CFAP54Q96N23 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP54Q96N23 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP54Q96N23 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.52■■□□□ 1.2
CFAP54Q96N23 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.52■■□□□ 1.2
CFAP54Q96N23 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.52■■□□□ 1.2
CFAP54Q96N23 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CFAP54Q96N23 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.19
CFAP54Q96N23 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 AC137761.2-201ENST00000561729 223 ntBASIC22.51■■□□□ 1.19
CFAP54Q96N23 AC145350.3-201ENST00000569033 163 ntBASIC22.51■■□□□ 1.19
CFAP54Q96N23 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.51■■□□□ 1.19
CFAP54Q96N23 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CFAP54Q96N23 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 PRORSD1P-201ENST00000295112 541 ntBASIC22.5■■□□□ 1.19
CFAP54Q96N23 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.5■■□□□ 1.19
CFAP54Q96N23 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CFAP54Q96N23 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP54Q96N23 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP54Q96N23 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CFAP54Q96N23 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP54Q96N23 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.49■■□□□ 1.19
CFAP54Q96N23 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CFAP54Q96N23 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CFAP54Q96N23 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.48■■□□□ 1.19
CFAP54Q96N23 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CFAP54Q96N23 RPS2P52-201ENST00000469610 820 ntBASIC22.47■■□□□ 1.19
CFAP54Q96N23 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.47■■□□□ 1.19
CFAP54Q96N23 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CFAP54Q96N23 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CFAP54Q96N23 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
CFAP54Q96N23 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.47■■□□□ 1.19
CFAP54Q96N23 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.47■■□□□ 1.19
CFAP54Q96N23 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CFAP54Q96N23 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CFAP54Q96N23 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP54Q96N23 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP54Q96N23 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.46■■□□□ 1.19
CFAP54Q96N23 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP54Q96N23 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms