Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.64■□□□□ 0.74
FOXRED1Q96CU9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.64■□□□□ 0.74
FOXRED1Q96CU9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
FOXRED1Q96CU9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXRED1Q96CU9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXRED1Q96CU9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 AC087393.1-201ENST00000582896 145 ntBASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXRED1Q96CU9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXRED1Q96CU9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 TSPY13P-201ENST00000338964 914 ntBASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 AC129492.7-201ENST00000622992 756 ntBASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXRED1Q96CU9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FOXRED1Q96CU9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXRED1Q96CU9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXRED1Q96CU9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXRED1Q96CU9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
FOXRED1Q96CU9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXRED1Q96CU9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 MIR6765-201ENST00000614092 87 ntBASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXRED1Q96CU9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXRED1Q96CU9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXRED1Q96CU9 C1orf229-201ENST00000623686 2258 ntBASIC19.57■□□□□ 0.72
FOXRED1Q96CU9 ATP5G2P3-201ENST00000429083 425 ntBASIC19.57■□□□□ 0.72
FOXRED1Q96CU9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXRED1Q96CU9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms