Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLCO4A1Q96BD0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 MIR639-201ENST00000384974 98 ntBASIC21.31■■□□□ 1
SLCO4A1Q96BD0 RP9P-202ENST00000450133 1212 ntBASIC21.31■■□□□ 1
SLCO4A1Q96BD0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLCO4A1Q96BD0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 AC092296.2-201ENST00000589470 999 ntBASIC21.3■■□□□ 1
SLCO4A1Q96BD0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLCO4A1Q96BD0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 AC093536.1-201ENST00000569153 554 ntBASIC21.29■■□□□ 1
SLCO4A1Q96BD0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.29■■□□□ 1
SLCO4A1Q96BD0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.28■■□□□ 1
SLCO4A1Q96BD0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLCO4A1Q96BD0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLCO4A1Q96BD0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.27■□□□□ 0.99
SLCO4A1Q96BD0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLCO4A1Q96BD0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
SLCO4A1Q96BD0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.27■□□□□ 0.99
SLCO4A1Q96BD0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.26■□□□□ 0.99
SLCO4A1Q96BD0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLCO4A1Q96BD0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLCO4A1Q96BD0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SLCO4A1Q96BD0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLCO4A1Q96BD0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLCO4A1Q96BD0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms