Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBE2FQ969M7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE2FQ969M7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2FQ969M7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
UBE2FQ969M7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2FQ969M7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2FQ969M7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2FQ969M7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2FQ969M7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.68■□□□□ 0.9
UBE2FQ969M7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2FQ969M7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 AL137060.1-201ENST00000618151 2648 ntBASIC20.67■□□□□ 0.9
UBE2FQ969M7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2FQ969M7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE2FQ969M7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
UBE2FQ969M7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.66■□□□□ 0.9
UBE2FQ969M7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2FQ969M7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBE2FQ969M7 AC026202.3-201ENST00000600805 1127 ntBASIC20.66■□□□□ 0.9
UBE2FQ969M7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2FQ969M7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2FQ969M7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2FQ969M7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBE2FQ969M7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBE2FQ969M7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE2FQ969M7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE2FQ969M7 AC007029.1-201ENST00000604183 313 ntBASIC20.65■□□□□ 0.9
UBE2FQ969M7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE2FQ969M7 AL024507.2-201ENST00000606070 2574 ntBASIC20.65■□□□□ 0.9
UBE2FQ969M7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2FQ969M7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBE2FQ969M7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBE2FQ969M7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
UBE2FQ969M7 KRT18P10-201ENST00000388836 1287 ntBASIC20.64■□□□□ 0.89
UBE2FQ969M7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE2FQ969M7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2FQ969M7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE2FQ969M7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2FQ969M7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE2FQ969M7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2FQ969M7 AC022413.1-201ENST00000624602 984 ntBASIC20.63■□□□□ 0.89
UBE2FQ969M7 AC090877.2-201ENST00000558441 1738 ntBASIC20.63■□□□□ 0.89
UBE2FQ969M7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2FQ969M7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2FQ969M7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2FQ969M7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2FQ969M7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2FQ969M7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms