Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP9XQ93008 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP9XQ93008 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.11■□□□□ 0.81
USP9XQ93008 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP9XQ93008 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
USP9XQ93008 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.1■□□□□ 0.81
USP9XQ93008 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
USP9XQ93008 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP9XQ93008 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
USP9XQ93008 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
USP9XQ93008 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP9XQ93008 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.1■□□□□ 0.81
USP9XQ93008 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.1■□□□□ 0.81
USP9XQ93008 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP9XQ93008 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.1■□□□□ 0.81
USP9XQ93008 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP9XQ93008 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.1■□□□□ 0.81
USP9XQ93008 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP9XQ93008 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.09■□□□□ 0.81
USP9XQ93008 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP9XQ93008 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP9XQ93008 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP9XQ93008 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP9XQ93008 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.09■□□□□ 0.81
USP9XQ93008 AC096887.2-201ENST00000623443 1957 ntBASIC20.09■□□□□ 0.81
USP9XQ93008 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.09■□□□□ 0.81
USP9XQ93008 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.09■□□□□ 0.81
USP9XQ93008 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP9XQ93008 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP9XQ93008 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.08■□□□□ 0.81
USP9XQ93008 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.08■□□□□ 0.81
USP9XQ93008 AC137761.2-201ENST00000561729 223 ntBASIC20.08■□□□□ 0.81
USP9XQ93008 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.08■□□□□ 0.81
USP9XQ93008 AC145350.3-201ENST00000569033 163 ntBASIC20.08■□□□□ 0.81
USP9XQ93008 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.08■□□□□ 0.81
USP9XQ93008 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP9XQ93008 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP9XQ93008 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP9XQ93008 CD99P1-205ENST00000527459 561 ntBASIC20.08■□□□□ 0.8
USP9XQ93008 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.08■□□□□ 0.8
USP9XQ93008 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.08■□□□□ 0.8
USP9XQ93008 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.08■□□□□ 0.8
USP9XQ93008 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
USP9XQ93008 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP9XQ93008 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
USP9XQ93008 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP9XQ93008 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP9XQ93008 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.07■□□□□ 0.8
USP9XQ93008 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.07■□□□□ 0.8
USP9XQ93008 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.07■□□□□ 0.8
USP9XQ93008 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP9XQ93008 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP9XQ93008 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP9XQ93008 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.07■□□□□ 0.8
USP9XQ93008 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
USP9XQ93008 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.07■□□□□ 0.8
USP9XQ93008 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.07■□□□□ 0.8
USP9XQ93008 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.07■□□□□ 0.8
USP9XQ93008 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP9XQ93008 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP9XQ93008 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.06■□□□□ 0.8
USP9XQ93008 AL499627.2-201ENST00000606283 725 ntBASIC20.06■□□□□ 0.8
USP9XQ93008 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP9XQ93008 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP9XQ93008 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP9XQ93008 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.06■□□□□ 0.8
USP9XQ93008 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.06■□□□□ 0.8
USP9XQ93008 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.06■□□□□ 0.8
USP9XQ93008 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.06■□□□□ 0.8
USP9XQ93008 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.06■□□□□ 0.8
USP9XQ93008 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.05■□□□□ 0.8
USP9XQ93008 AL109923.1-201ENST00000618799 583 ntBASIC20.05■□□□□ 0.8
USP9XQ93008 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
USP9XQ93008 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
USP9XQ93008 MIR4651-201ENST00000582622 73 ntBASIC20.05■□□□□ 0.8
USP9XQ93008 AC008687.6-201ENST00000596318 630 ntBASIC20.05■□□□□ 0.8
USP9XQ93008 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.05■□□□□ 0.8
USP9XQ93008 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP9XQ93008 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP9XQ93008 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
USP9XQ93008 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP9XQ93008 MIR663A-201ENST00000385250 93 ntBASIC20.04■□□□□ 0.8
USP9XQ93008 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
USP9XQ93008 AC006970.2-201ENST00000450065 779 ntBASIC20.04■□□□□ 0.8
USP9XQ93008 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP9XQ93008 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP9XQ93008 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.04■□□□□ 0.8
USP9XQ93008 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP9XQ93008 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.04■□□□□ 0.8
USP9XQ93008 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
USP9XQ93008 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP9XQ93008 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP9XQ93008 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.03■□□□□ 0.8
USP9XQ93008 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.03■□□□□ 0.8
USP9XQ93008 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
USP9XQ93008 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.03■□□□□ 0.8
USP9XQ93008 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP9XQ93008 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP9XQ93008 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP9XQ93008 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms