Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLHC1Q8NHS4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 MIR4281-201ENST00000580852 62 ntBASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 THA1P-201ENST00000590384 1145 ntBASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLHC1Q8NHS4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 AC092068.2-201ENST00000590491 1708 ntBASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 AF131216.4-201ENST00000638924 1588 ntBASIC21.69■■□□□ 1.06
CLHC1Q8NHS4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 AL033527.3-201ENST00000566366 1196 ntBASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 AC074183.2-201ENST00000623112 922 ntBASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CLHC1Q8NHS4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLHC1Q8NHS4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 AC012354.3-201ENST00000623734 483 ntBASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CLHC1Q8NHS4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 KRT18P24-201ENST00000344739 1156 ntBASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLHC1Q8NHS4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CLHC1Q8NHS4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CLHC1Q8NHS4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.64■■□□□ 1.06
CLHC1Q8NHS4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLHC1Q8NHS4 KRT8P33-201ENST00000508125 1423 ntBASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLHC1Q8NHS4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms