Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF555Q8NEP9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF555Q8NEP9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 AC007375.3-201ENST00000600936 2314 ntBASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF555Q8NEP9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF555Q8NEP9 AL024507.2-201ENST00000606070 2574 ntBASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF555Q8NEP9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF555Q8NEP9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 AC242852.2-201ENST00000615738 1807 ntBASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ZNF555Q8NEP9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF555Q8NEP9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF555Q8NEP9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 AL157400.5-201ENST00000507624 621 ntBASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF555Q8NEP9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 AL161729.1-201ENST00000604104 1402 ntBASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 SMPD5-203ENST00000639008 1464 ntBASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNF555Q8NEP9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms