Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.86■□□□□ 0.77
DNAAF1Q8NEP3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNAAF1Q8NEP3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNAAF1Q8NEP3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.85■□□□□ 0.77
DNAAF1Q8NEP3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNAAF1Q8NEP3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 U85056.1-201ENST00000616429 682 ntBASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNAAF1Q8NEP3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNAAF1Q8NEP3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.83■□□□□ 0.76
DNAAF1Q8NEP3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNAAF1Q8NEP3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 LINC00565-201ENST00000562710 2331 ntBASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 LONRF2P2-201ENST00000439212 571 ntBASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 AC129492.7-201ENST00000622992 756 ntBASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 AL161729.1-201ENST00000604104 1402 ntBASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 AC092068.2-201ENST00000590491 1708 ntBASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNAAF1Q8NEP3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
DNAAF1Q8NEP3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNAAF1Q8NEP3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 KRT18P60-201ENST00000312876 1297 ntBASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
DNAAF1Q8NEP3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
DNAAF1Q8NEP3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
DNAAF1Q8NEP3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms